Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_01620 | Not Available | Negative | 381685 - 382419 | 27215.6 |
| pseudouridylate synthase | DU508_01625 | Not Available | Negative | 382458 - 383141 | 26150.6 |
| hypothetical protein | DU508_01635 | Not Available | Negative | 384066 - 384926 | 33234.7 |
| kynureninase | DU508_01640 | Not Available | Negative | 384930 - 386225 | 49025.6 |
| pyridoxamine 5'-phosphate oxidase | DU508_01645 | Not Available | Negative | 386292 - 386780 | 18274.7 |
| dna-3-methyladenine glycosylase | DU508_01650 | Not Available | Negative | 386834 - 387439 | 22072.4 |
| gaf domain-containing protein | DU508_01655 | Not Available | Negative | 387442 - 387930 | 17996.8 |
| duf3291 domain-containing protein | DU508_01660 | Not Available | Positive | 388055 - 388753 | 26782.2 |
| hypothetical protein | DU508_01665 | Not Available | Positive | 388793 - 389044 | 9752.8 |
| dabb family protein | DU508_01670 | Not Available | Negative | 389412 - 389747 | 12987.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

