Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_17005 | Not Available | Negative | 3912177 - 3912974 | 30971.5 |
| tetr/acrr family transcriptional regulator | DU508_17010 | Not Available | Negative | 3913024 - 3913599 | 21868.3 |
| hypothetical protein | DU508_17015 | Not Available | Negative | 3913692 - 3913859 | 5900.1 |
| type 1 glutamine amidotransferase domain-containing protein | DU508_17020 | Not Available | Positive | 3913964 - 3914671 | 26254.8 |
| nad-dependent epimerase/dehydratase family protein | DU508_17025 | Not Available | Positive | 3914674 - 3915612 | 35440.7 |
| arac family transcriptional regulator | DU508_17030 | Not Available | Positive | 3915628 - 3916563 | 35535.4 |
| alpha/beta hydrolase | DU508_17035 | Not Available | Positive | 3916690 - 3917673 | 36295.5 |
| arac family transcriptional regulator | DU508_17040 | Not Available | Negative | 3917900 - 3918796 | 34546.3 |
| aldo/keto reductase | DU508_17045 | Not Available | Negative | 3918836 - 3919840 | 37070.6 |
| hypothetical protein | DU508_17050 | Not Available | Negative | 3920088 - 3920279 | 7357.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

