Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_16850 | Not Available | Positive | 3880765 - 3882303 | 53411.3 |
| hypothetical protein | DU508_16855 | Not Available | Positive | 3882400 - 3882675 | 10534.8 |
| hypothetical protein | DU508_16860 | Not Available | Positive | 3882698 - 3883111 | 15527.5 |
| lyttr family transcriptional regulator | DU508_16865 | Not Available | Positive | 3883496 - 3884347 | 32821.0 |
| intradiol ring-cleavage dioxygenase | DU508_16870 | Not Available | Positive | 3884419 - 3885615 | 45670.5 |
| hypothetical protein | DU508_16875 | Not Available | Negative | 3885673 - 3885960 | 10846.2 |
| hypothetical protein | DU508_16880 | Not Available | Negative | 3885914 - 3886024 | 4368.28 |
| dihydrofolate reductase | DU508_16885 | Not Available | Negative | 3886045 - 3886599 | 20827.3 |
| voc family protein | DU508_16890 | Not Available | Negative | 3886647 - 3887099 | 16464.9 |
| voc family protein | DU508_16895 | Not Available | Negative | 3887112 - 3887579 | 17914.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

