Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_16645 | Not Available | Positive | 3849434 - 3849862 | 15964.2 |
| nitrogen regulatory iia protein | DU508_16650 | Not Available | Positive | 3849876 - 3850163 | 11397.0 |
| conjugative transposon protein tram | DU508_16655 | Not Available | Positive | 3850150 - 3851496 | 48975.9 |
| conjugative transposon protein tran | DU508_16660 | Not Available | Positive | 3851521 - 3852414 | 34130.3 |
| conjugal transfer protein trao | DU508_16665 | Not Available | Positive | 3852435 - 3852995 | 21173.5 |
| duf3872 domain-containing protein | DU508_16670 | Not Available | Positive | 3853008 - 3853457 | 17224.2 |
| duf1801 domain-containing protein | DU508_16675 | Not Available | Negative | 3853563 - 3853934 | 14560.9 |
| arac family transcriptional regulator | DU508_16680 | Not Available | Negative | 3853940 - 3854398 | 17256.8 |
| yafy family transcriptional regulator | DU508_16685 | Not Available | Negative | 3854463 - 3855173 | 27257.8 |
| gnat family n-acetyltransferase | DU508_16690 | Not Available | Negative | 3855309 - 3855752 | 17163.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

