Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_01570 | Not Available | Positive | 372186 - 373331 | 43053.9 |
| hypothetical protein | DU508_01575 | Not Available | Positive | 373389 - 373838 | 16960.3 |
| endonuclease v | DU508_01580 | Not Available | Positive | 374068 - 374766 | 26007.7 |
| oxygen-dependent coproporphyrinogen oxidase | DU508_01585 | Not Available | Negative | 374763 - 375656 | 34877.2 |
| mfs transporter | DU508_01590 | Not Available | Negative | 375756 - 376988 | 44527.5 |
| coproporphyrinogen iii oxidase | DU508_01595 | Not Available | Negative | 377085 - 377273 | 6359.54 |
| phosphoribosylpyrophosphate synthetase | DU508_01600 | Not Available | Negative | 377424 - 377729 | 11310.3 |
| duf4442 domain-containing protein | DU508_01605 | Not Available | Positive | 377810 - 378295 | 18777.0 |
| atp-binding protein | DU508_01610 | Not Available | Positive | 378303 - 378929 | 23591.6 |
| mate family efflux transporter | DU508_01615 | Not Available | Positive | 380181 - 381551 | 49608.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

