Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_16595 | Not Available | Positive | 3840307 - 3841008 | 27031.0 |
| thif family adenylyltransferase | DU508_16600 | Not Available | Positive | 3840983 - 3842161 | 44267.1 |
| hypothetical protein | DU508_16605 | Not Available | Positive | 3842142 - 3842564 | 16524.9 |
| hypothetical protein | DU508_16610 | Not Available | Negative | 3842651 - 3843787 | 44130.6 |
| duf4134 domain-containing protein | DU508_16615 | Not Available | Positive | 3843970 - 3844275 | 10569.9 |
| duf4133 domain-containing protein | DU508_16620 | Not Available | Positive | 3844287 - 3844619 | 12460.7 |
| trag family conjugative transposon atpase | DU508_16625 | Not Available | Positive | 3844616 - 3847120 | 95664.1 |
| duf4141 domain-containing protein | DU508_16630 | Not Available | Positive | 3847148 - 3847780 | 23797.7 |
| conjugative transposon protein traj | DU508_16635 | Not Available | Positive | 3847783 - 3848778 | 36635.8 |
| conjugative transposon protein trak | DU508_16640 | Not Available | Positive | 3848799 - 3849422 | 24132.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

