Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DU508_16390 | Not Available | Negative | 3786682 - 3787827 | 43930.9 |
| hypothetical protein | DU508_16395 | Not Available | Negative | 3788017 - 3788388 | 14188.2 |
| hypothetical protein | DU508_16400 | Not Available | Positive | 3788637 - 3788789 | 5795.9 |
| arac family transcriptional regulator | DU508_16405 | Not Available | Negative | 3789208 - 3790203 | 38410.6 |
| pyridoxal phosphate-dependent aminotransferase family protein | DU508_16410 | Not Available | Positive | 3790607 - 3791812 | 43861.7 |
| hypothetical protein | DU508_16415 | Not Available | Positive | 3791809 - 3792930 | 42919.7 |
| nad(p)-dependent oxidoreductase | DU508_16420 | Not Available | Positive | 3792927 - 3793916 | 37345.4 |
| inositol-3-phosphate synthase | DU508_16425 | Not Available | Positive | 3793934 - 3795259 | 49234.6 |
| phosphatidylglycerophosphatase a | DU508_16430 | Not Available | Positive | 3795256 - 3795714 | 17014.2 |
| gtra family protein | DU508_16435 | Not Available | Positive | 3795717 - 3796094 | 14374.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

