Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DU508_16140 | Not Available | Positive | 3722729 - 3723454 | 28311.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | DU508_16145 | Not Available | Positive | 3723457 - 3723747 | 11098.4 |
| abc transporter atp-binding protein | DU508_16150 | Not Available | Positive | 3723840 - 3724598 | 27528.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DU508_16155 | Not Available | Positive | 3724680 - 3725228 | 20842.4 |
| duf2795 domain-containing protein | DU508_16160 | Not Available | Positive | 3725314 - 3725535 | 8601.69 |
| phosphoribosylformylglycinamidine cyclo-ligase | DU508_16165 | Not Available | Negative | 3725930 - 3727111 | 43368.8 |
| glutamine synthetase type iii | DU508_16170 | Not Available | Negative | 3727485 - 3729659 | 80969.8 |
| energy transducer tonb | DU508_16175 | Not Available | Positive | 3729863 - 3730705 | 31140.8 |
| phosphoribosylformylglycinamidine synthase | DU508_16180 | Not Available | Negative | 3731233 - 3734892 | 133619.0 |
| voc family protein | DU508_16185 | Not Available | Positive | 3735196 - 3735579 | 14824.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

