Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3698078 - 3698151 | Not Available |
| transcriptional repressor | DU508_16045 | Not Available | Negative | 3698262 - 3698699 | 16501.8 |
| hypothetical protein | DU508_16050 | Not Available | Negative | 3698711 - 3699136 | 15943.5 |
| hypothetical protein | DU508_16055 | Not Available | Negative | 3699157 - 3699600 | 16709.9 |
| abc transporter permease | DU508_16060 | Not Available | Negative | 3699600 - 3700799 | 43747.8 |
| abc transporter atp-binding protein | DU508_16065 | Not Available | Negative | 3700799 - 3701425 | 22931.7 |
| merc domain-containing protein | DU508_16070 | Not Available | Negative | 3701657 - 3702043 | 14075.0 |
| tonb-dependent receptor | DU508_16075 | Not Available | Positive | 3702243 - 3704699 | 91818.5 |
| paai family thioesterase | DU508_16080 | Not Available | Positive | 3704827 - 3705267 | 16220.8 |
| hypothetical protein | DU508_16085 | Not Available | Positive | 3705369 - 3705608 | 9147.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

