Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein | DU508_15990 | Not Available | Positive | 3687923 - 3688120 | 7103.51 |
| arac family transcriptional regulator | DU508_15995 | Not Available | Positive | 3688613 - 3689389 | 29951.4 |
| hsp70 family protein | DU508_16000 | Not Available | Negative | 3689673 - 3690941 | 47606.7 |
| acyl-coa desaturase | DU508_16005 | Not Available | Positive | 3691426 - 3692508 | 41434.0 |
| pyridoxamine 5'-phosphate oxidase family protein | DU508_16010 | Not Available | Positive | 3692751 - 3693197 | 17039.4 |
| hypothetical protein | DU508_16015 | Not Available | Positive | 3693347 - 3693805 | 16774.4 |
| hypothetical protein | DU508_16020 | Not Available | Negative | 3693802 - 3694485 | 25805.5 |
| tetr/acrr family transcriptional regulator | DU508_16025 | Not Available | Negative | 3694808 - 3695440 | 23796.6 |
| hypothetical protein | DU508_16030 | Not Available | Positive | 3695722 - 3695967 | 9355.79 |
| atp-binding protein | DU508_16035 | Not Available | Negative | 3696319 - 3697440 | 43742.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

