Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydratase | DU508_15940 | Not Available | Negative | 3680021 - 3680854 | 31617.1 |
| duf559 domain-containing protein | DU508_15945 | Not Available | Negative | 3681266 - 3681667 | 15819.2 |
| sterol desaturase family protein | DU508_15950 | Not Available | Negative | 3681861 - 3682832 | 38329.2 |
| 3-dehydroquinate synthase | DU508_15955 | Not Available | Negative | 3682834 - 3683892 | 39376.0 |
| rna-binding s4 domain-containing protein | DU508_15960 | Not Available | Negative | 3683892 - 3684098 | 7521.33 |
| proline dehydrogenase | DU508_15965 | Not Available | Positive | 3684194 - 3685378 | 44938.2 |
| duf962 domain-containing protein | DU508_15970 | Not Available | Negative | 3685642 - 3685962 | 12508.3 |
| had family phosphatase | DU508_15975 | Not Available | Negative | 3685971 - 3686606 | 24535.2 |
| cold shock domain-containing protein | DU508_15980 | Not Available | Positive | 3686840 - 3687079 | 8730.77 |
| cold shock domain-containing protein | DU508_15985 | Not Available | Positive | 3687728 - 3687913 | 6817.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

