Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_15790 | Not Available | Positive | 3644410 - 3645549 | 41900.7 |
| atp-dependent endonuclease | DU508_15795 | Not Available | Positive | 3645892 - 3647325 | 54612.6 |
| hypothetical protein | DU508_15800 | Not Available | Positive | 3647532 - 3648203 | 25304.3 |
| carbohydrate-binding domain-containing protein | DU508_15805 | Not Available | Positive | 3648319 - 3649869 | 52676.7 |
| rna-binding protein | DU508_15810 | Not Available | Negative | 3649973 - 3650815 | 31958.0 |
| abc transporter atp-binding protein | DU508_15815 | Not Available | Positive | 3651274 - 3653010 | 63614.2 |
| abc transporter atp-binding protein | DU508_15820 | Not Available | Positive | 3652994 - 3654754 | 65292.6 |
| smp-30/gluconolactonase/lre family protein | DU508_15825 | Not Available | Positive | 3655307 - 3656194 | 33218.4 |
| hypothetical protein | DU508_15830 | Not Available | Positive | 3656341 - 3657246 | 34292.4 |
| hypothetical protein | DU508_15835 | Not Available | Positive | 3657243 - 3657662 | 16203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

