Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-rhamnosidase | DU508_15740 | Not Available | Negative | 3635501 - 3638170 | 100620.0 |
| srpbcc family protein | DU508_15745 | Not Available | Negative | 3638307 - 3638705 | 14977.0 |
| orotate phosphoribosyltransferase | DU508_15750 | Not Available | Negative | 3638739 - 3639404 | 24195.9 |
| nudix domain-containing protein | DU508_15755 | Not Available | Positive | 3639403 - 3640014 | 23588.8 |
| hypothetical protein | DU508_15760 | Not Available | Positive | 3640295 - 3640522 | 8698.68 |
| hypothetical protein | DU508_15765 | Not Available | Negative | 3640519 - 3641127 | 24297.9 |
| sigma-70 family rna polymerase sigma factor | DU508_15770 | Not Available | Negative | 3641117 - 3641620 | 19731.8 |
| pantetheine-phosphate adenylyltransferase | DU508_15775 | Not Available | Negative | 3641830 - 3642291 | 17297.1 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DU508_15780 | Not Available | Negative | 3642508 - 3643044 | 20219.4 |
| duf3822 family protein | DU508_15785 | Not Available | Negative | 3643035 - 3643841 | 30720.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

