Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2200 domain-containing protein | DU508_15690 | Not Available | Negative | 3624009 - 3624368 | 14047.0 |
| duf4287 domain-containing protein | DU508_15695 | Not Available | Negative | 3624421 - 3624972 | 20734.8 |
| nad(+)--rifampin adp-ribosyltransferase | DU508_15700 | Not Available | Negative | 3625259 - 3625702 | 16444.6 |
| marr family transcriptional regulator | DU508_15705 | Not Available | Negative | 3625716 - 3626174 | 17592.6 |
| peptidase m28 | DU508_15710 | Not Available | Positive | 3626412 - 3628061 | 60855.3 |
| porin family protein | DU508_15715 | Not Available | Negative | 3628162 - 3628764 | 21211.2 |
| nad(p)h-dependent oxidoreductase | DU508_15720 | Not Available | Negative | 3629433 - 3629990 | 20412.8 |
| mfs transporter | DU508_15725 | Not Available | Positive | 3630084 - 3631283 | 43251.1 |
| hypothetical protein | DU508_15730 | Not Available | Negative | 3631340 - 3632029 | 26443.6 |
| atp-dependent chaperone clpb | DU508_15735 | Not Available | Negative | 3632144 - 3634744 | 97646.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

