Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yigz family protein | DU508_01470 | Not Available | Negative | 347768 - 348382 | 23236.2 |
| dmt family transporter | DU508_01475 | Not Available | Negative | 348369 - 349238 | 31879.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DU508_01480 | Not Available | Negative | 349239 - 350291 | 39533.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | DU508_01485 | Not Available | Positive | 350372 - 351229 | 32153.9 |
| site-specific tyrosine recombinase xerd | DU508_01490 | Not Available | Negative | 351550 - 352449 | 34018.6 |
| type ii 3-dehydroquinate dehydratase | DU508_01495 | Not Available | Positive | 352650 - 353072 | 15407.5 |
| tlpa family protein disulfide reductase | DU508_01500 | Not Available | Positive | 353084 - 353803 | 27252.8 |
| glycosyltransferase family 2 protein | DU508_01505 | Not Available | Negative | 353800 - 354813 | 39087.2 |
| lauroyl acyltransferase | DU508_01510 | Not Available | Negative | 354819 - 355691 | 34319.3 |
| hypothetical protein | DU508_01515 | Not Available | Positive | 355730 - 356341 | 24357.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

