Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdia-regulated family protein | DU508_15485 | Not Available | Positive | 3568825 - 3569550 | 26959.3 |
| hypothetical protein | DU508_15490 | Not Available | Positive | 3569590 - 3573195 | 137334.0 |
| gaf domain-containing protein | DU508_15495 | Not Available | Positive | 3573431 - 3575743 | 89583.3 |
| hypothetical protein | DU508_15500 | Not Available | Negative | 3575887 - 3576489 | 21206.4 |
| response regulator | DU508_15505 | Not Available | Positive | 3576758 - 3577114 | 13243.6 |
| hd domain-containing protein | DU508_15510 | Not Available | Positive | 3577740 - 3578594 | 32189.4 |
| hypothetical protein | DU508_15515 | Not Available | Positive | 3579388 - 3579600 | 8087.03 |
| pkd domain-containing protein | DU508_15520 | Not Available | Positive | 3579921 - 3583412 | 127350.0 |
| type ix secretion system membrane protein porp/sprf | DU508_15525 | Not Available | Positive | 3583415 - 3584425 | 37564.8 |
| rna polymerase sigma-54 factor | DU508_15530 | Not Available | Negative | 3584469 - 3585941 | 56652.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

