Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DU508_15435 | Not Available | Positive | 3558674 - 3559735 | 40822.8 |
| dna-binding response regulator | DU508_15440 | Not Available | Positive | 3559755 - 3560462 | 27069.4 |
| hypothetical protein | DU508_15445 | Not Available | Negative | 3560760 - 3560969 | 8071.68 |
| sdr family nad(p)-dependent oxidoreductase | DU508_15450 | Not Available | Positive | 3561365 - 3562279 | 32863.7 |
| duf2147 domain-containing protein | DU508_15455 | Not Available | Positive | 3562364 - 3562798 | 16378.8 |
| hypothetical protein | DU508_15460 | Not Available | Positive | 3563005 - 3563358 | 13215.1 |
| arac family transcriptional regulator | DU508_15465 | Not Available | Positive | 3563373 - 3564281 | 35003.9 |
| Trna-met | Not Available | Not Available | Positive | 3564945 - 3565021 | Not Available |
| hd domain-containing protein | DU508_15475 | Not Available | Positive | 3565393 - 3566595 | 46385.1 |
| polyphosphate kinase 1 | DU508_15480 | Not Available | Positive | 3566604 - 3568658 | 78899.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

