Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_15320 | Not Available | Positive | 3533161 - 3533424 | 9957.43 |
| hypothetical protein | DU508_15325 | Not Available | Positive | 3533895 - 3534248 | 12966.8 |
| excinuclease abc subunit a | DU508_15335 | Not Available | Negative | 3535034 - 3537592 | 93238.1 |
| flavin-dependent oxidoreductase | DU508_15340 | Not Available | Positive | 3538328 - 3539350 | 37751.6 |
| hypothetical protein | DU508_15345 | Not Available | Negative | 3539401 - 3539688 | 10854.4 |
| alkaline phosphatase family protein | DU508_15350 | Not Available | Negative | 3539858 - 3541786 | 73165.2 |
| hd domain-containing protein | DU508_15355 | Not Available | Positive | 3541899 - 3542519 | 23573.8 |
| sensor histidine kinase | DU508_15365 | Not Available | Negative | 3543055 - 3544305 | 46993.5 |
| dna-binding response regulator | DU508_15370 | Not Available | Negative | 3544302 - 3544979 | 25694.3 |
| tonb-dependent receptor | DU508_15380 | Not Available | Positive | 3545523 - 3547940 | 91186.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

