Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | DU508_15270 | Not Available | Negative | 3518931 - 3520055 | 41616.2 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_15275 | Not Available | Positive | 3520331 - 3521413 | 40197.2 |
| acrb/acrd/acrf family protein | DU508_15280 | Not Available | Positive | 3521434 - 3524604 | 115665.0 |
| tolc family protein | DU508_15285 | Not Available | Positive | 3524597 - 3526030 | 52849.3 |
| xre family transcriptional regulator | DU508_15290 | Not Available | Negative | 3526897 - 3527154 | 9896.07 |
| hypothetical protein | DU508_15295 | Not Available | Positive | 3527800 - 3528552 | 29839.7 |
| hypothetical protein | DU508_15300 | Not Available | Positive | 3528859 - 3529953 | 42931.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DU508_15305 | Not Available | Positive | 3530428 - 3531786 | 49698.8 |
| hypothetical protein | DU508_15310 | Not Available | Negative | 3532464 - 3532613 | 5426.58 |
| cupin domain-containing protein | DU508_15315 | Not Available | Negative | 3532678 - 3532998 | 11988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

