Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | DU508_15165 | Not Available | Positive | 3494530 - 3494892 | 13987.9 |
| hypothetical protein | DU508_15170 | Not Available | Positive | 3494897 - 3496399 | 57384.0 |
| hypothetical protein | DU508_15175 | Not Available | Negative | 3496598 - 3499261 | 99962.5 |
| glpgli family protein | DU508_15180 | Not Available | Negative | 3499258 - 3500295 | 38545.4 |
| 50s ribosomal protein l21 | DU508_15185 | Not Available | Positive | 3500644 - 3500955 | 11385.0 |
| 50s ribosomal protein l27 | DU508_15190 | Not Available | Positive | 3501007 - 3501417 | 14402.4 |
| polyprenyl synthetase family protein | DU508_15195 | Not Available | Negative | 3501585 - 3502574 | 37114.5 |
| ribonuclease r | DU508_15200 | Not Available | Negative | 3502604 - 3504736 | 80939.8 |
| abc transporter atp-binding protein | DU508_15205 | Not Available | Negative | 3504972 - 3506675 | 63608.3 |
| 3'-5' exonuclease | DU508_15210 | Not Available | Negative | 3506675 - 3507388 | 27499.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

