Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane dipeptidase | DU508_15115 | Not Available | Positive | 3484053 - 3485216 | 42751.5 |
| thioredoxin-disulfide reductase | DU508_15120 | Not Available | Positive | 3485363 - 3486319 | 34244.7 |
| beta-n-acetylhexosaminidase | DU508_15125 | Not Available | Positive | 3486668 - 3488578 | 70932.2 |
| hypothetical protein | DU508_15130 | Not Available | Positive | 3488640 - 3489242 | 22548.7 |
| diacylglycerol kinase family protein | DU508_15135 | Not Available | Positive | 3489632 - 3490003 | 13627.0 |
| duf922 domain-containing protein | DU508_15140 | Not Available | Negative | 3489995 - 3490561 | 22248.5 |
| hypothetical protein | DU508_15145 | Not Available | Negative | 3490668 - 3491267 | 23317.7 |
| rna polymerase sigma factor | DU508_15150 | Not Available | Negative | 3491254 - 3491751 | 19477.3 |
| dicarboxylate/amino acid:cation symporter | DU508_15155 | Not Available | Positive | 3491893 - 3493458 | 56961.0 |
| hypothetical protein | DU508_15160 | Not Available | Positive | 3493455 - 3493955 | 19296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

