Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | DU508_01425 | Not Available | Positive | 338149 - 338655 | 18712.6 |
| Trna-pseudo | Not Available | Not Available | Positive | 338806 - 338880 | Not Available |
| atp-dependent helicase | DU508_01430 | Not Available | Positive | 339386 - 340681 | 48728.1 |
| ompa family protein | DU508_01435 | Not Available | Negative | 340924 - 342261 | 47928.2 |
| hypothetical protein | DU508_01440 | Not Available | Negative | 342486 - 343151 | 25228.3 |
| trmh family rna methyltransferase | DU508_01445 | Not Available | Negative | 343162 - 343692 | 19732.8 |
| galactokinase | DU508_01450 | Not Available | Negative | 343767 - 344918 | 42668.0 |
| galactose mutarotase | DU508_01455 | Not Available | Positive | 344995 - 346044 | 39014.3 |
| duf1398 domain-containing protein | DU508_01460 | Not Available | Positive | 346048 - 346443 | 14729.2 |
| phosphorylase | DU508_01465 | Not Available | Negative | 346851 - 347717 | 31667.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

