Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1049 domain-containing protein | DU508_15015 | Not Available | Negative | 3452638 - 3452916 | 10201.5 |
| hypothetical protein | DU508_15020 | Not Available | Negative | 3452919 - 3455723 | 108373.0 |
| eama family transporter | DU508_15025 | Not Available | Negative | 3457032 - 3457910 | 32814.4 |
| yjgp/yjgq family permease | DU508_15030 | Not Available | Negative | 3457913 - 3459016 | 41859.4 |
| trna guanosine(34) transglycosylase tgt | DU508_15035 | Not Available | Negative | 3459018 - 3460148 | 42551.3 |
| glycosyltransferase | DU508_15040 | Not Available | Positive | 3460368 - 3461468 | 42505.3 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DU508_15045 | Not Available | Positive | 3461492 - 3462127 | 23694.7 |
| peptidase m20 | DU508_15050 | Not Available | Negative | 3462375 - 3463349 | 35764.6 |
| chromosome segregation protein smc | DU508_15055 | Not Available | Negative | 3463747 - 3467286 | 135882.0 |
| hypothetical protein | DU508_15060 | Not Available | Positive | 3467285 - 3467464 | 6888.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

