Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | DU508_14965 | Not Available | Negative | 3441338 - 3442675 | 49551.2 |
| protein translocase subunit secdf | DU508_14970 | Not Available | Negative | 3442984 - 3445962 | 107377.0 |
| dihydrofolate reductase | DU508_14975 | Not Available | Negative | 3446412 - 3446912 | 19167.9 |
| four helix bundle protein | DU508_14980 | Not Available | Negative | 3446954 - 3447331 | 14656.5 |
| thymidylate synthase | DU508_14985 | Not Available | Negative | 3447477 - 3448271 | 30083.0 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DU508_14990 | Not Available | Positive | 3448530 - 3449333 | 29618.5 |
| osmc family peroxiredoxin | DU508_14995 | Not Available | Positive | 3449466 - 3449882 | 15280.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DU508_15000 | Not Available | Positive | 3450037 - 3451209 | 43021.5 |
| pirin family protein | DU508_15005 | Not Available | Positive | 3451368 - 3452090 | 26665.4 |
| hypothetical protein | DU508_15010 | Not Available | Positive | 3452158 - 3452454 | 10928.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

