Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | DU508_14915 | Not Available | Positive | 3431198 - 3432202 | 37494.0 |
| m20/m25/m40 family metallo-hydrolase | DU508_14920 | Not Available | Negative | 3432714 - 3434261 | 56792.7 |
| hypothetical protein | DU508_14925 | Not Available | Negative | 3434773 - 3435237 | 17324.3 |
| hypothetical protein | DU508_14930 | Not Available | Negative | 3435327 - 3436052 | 26637.7 |
| acetyl-coa carboxylase carboxyltransferase subunit beta | DU508_14935 | Not Available | Negative | 3436361 - 3437206 | 31265.1 |
| class ii fructose-bisphosphate aldolase | DU508_14940 | Not Available | Positive | 3437413 - 3438492 | 39845.3 |
| low affinity iron permease family protein | DU508_14945 | Not Available | Positive | 3438640 - 3439122 | 18164.9 |
| gnat family n-acetyltransferase | DU508_14950 | Not Available | Positive | 3439122 - 3439544 | 16003.1 |
| hydroxymethylglutaryl-coa lyase | DU508_14955 | Not Available | Negative | 3439580 - 3440440 | 31562.9 |
| methylglyoxal synthase | DU508_14960 | Not Available | Negative | 3440883 - 3441332 | 16674.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

