Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | DU508_14865 | Not Available | Negative | 3421918 - 3422526 | 23500.5 |
| zinc/iron permease | DU508_14870 | Not Available | Negative | 3422739 - 3423455 | 26247.8 |
| phosphatase pap2 family protein | DU508_14875 | Not Available | Negative | 3423456 - 3424019 | 21330.5 |
| class i sam-dependent methyltransferase | DU508_14880 | Not Available | Negative | 3424016 - 3424747 | 28767.3 |
| phosphoglucosamine mutase | DU508_14885 | Not Available | Positive | 3425181 - 3426566 | 50055.1 |
| cysteine desulfurase | DU508_14890 | Not Available | Positive | 3426658 - 3427806 | 42085.4 |
| hypothetical protein | DU508_14895 | Not Available | Positive | 3428171 - 3428368 | 7755.4 |
| hypothetical protein | DU508_14900 | Not Available | Positive | 3428507 - 3428710 | 7430.59 |
| mbl fold metallo-hydrolase | DU508_14905 | Not Available | Positive | 3428789 - 3429688 | 33439.4 |
| cytochrome ubiquinol oxidase subunit i | DU508_14910 | Not Available | Positive | 3429862 - 3431193 | 49150.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

