Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_14815 | Not Available | Positive | 3412630 - 3413091 | 17100.3 |
| duf3276 family protein | DU508_14820 | Not Available | Negative | 3413226 - 3413549 | 12749.7 |
| abc transporter atp-binding protein | DU508_14825 | Not Available | Negative | 3413629 - 3415419 | 67978.9 |
| glu/leu/phe/val dehydrogenase | DU508_14830 | Not Available | Positive | 3415737 - 3416825 | 39172.2 |
| transcription antitermination factor nusb | DU508_14835 | Not Available | Positive | 3416872 - 3417822 | 36905.7 |
| duf1573 domain-containing protein | DU508_14840 | Not Available | Positive | 3417825 - 3418268 | 15702.0 |
| preprotein translocase subunit yajc | DU508_14845 | Not Available | Positive | 3418313 - 3418639 | 11596.4 |
| ybbr-like domain-containing protein | DU508_14850 | Not Available | Positive | 3419019 - 3419876 | 32488.4 |
| dephospho-coa kinase | DU508_14855 | Not Available | Positive | 3419876 - 3420490 | 22816.5 |
| exonuclease | DU508_14860 | Not Available | Positive | 3420702 - 3421643 | 35988.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

