Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_14765 | Not Available | Negative | 3400943 - 3401473 | 19697.2 |
| patatin | DU508_14770 | Not Available | Negative | 3401470 - 3403761 | 86723.7 |
| tryptophan-rich sensory protein | DU508_14775 | Not Available | Negative | 3403817 - 3404290 | 18169.8 |
| m20/m25/m40 family metallo-hydrolase | DU508_14780 | Not Available | Negative | 3404338 - 3405687 | 49994.4 |
| alpha/beta hydrolase | DU508_14785 | Not Available | Negative | 3405903 - 3406736 | 31082.1 |
| ompa family protein | DU508_14790 | Not Available | Negative | 3407000 - 3407533 | 19555.4 |
| Trna-arg | Not Available | Not Available | Positive | 3407737 - 3407811 | Not Available |
| magnesium transporter | DU508_14800 | Not Available | Positive | 3409120 - 3410496 | 51223.8 |
| had family phosphatase | DU508_14805 | Not Available | Positive | 3410507 - 3411121 | 23639.2 |
| redox-regulated atpase ychf | DU508_14810 | Not Available | Negative | 3411376 - 3412476 | 40133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

