Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DU508_01375 | Not Available | Negative | 325938 - 327269 | 48028.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DU508_01380 | Not Available | Negative | 327937 - 329052 | 40878.2 |
| hypothetical protein | DU508_01385 | Not Available | Positive | 329223 - 329669 | 15898.9 |
| hypothetical protein | DU508_01390 | Not Available | Negative | 329936 - 330232 | 11225.6 |
| aminofutalosine synthase mqne | DU508_01395 | Not Available | Positive | 330501 - 331694 | 46076.0 |
| histidine phosphatase family protein | DU508_01400 | Not Available | Positive | 331760 - 332386 | 24054.7 |
| radical sam protein | DU508_01405 | Not Available | Positive | 332509 - 333234 | 27283.8 |
| fic family protein | DU508_01410 | Not Available | Positive | 333292 - 334068 | 30405.4 |
| hpf/raia family ribosome-associated protein | DU508_01415 | Not Available | Negative | 334684 - 334998 | 11598.8 |
| dna mismatch repair protein muts | DU508_01420 | Not Available | Positive | 335482 - 338094 | 98068.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

