Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_14565 | Not Available | Negative | 3365570 - 3365923 | 12783.1 |
| duf3999 domain-containing protein | DU508_14570 | Not Available | Negative | 3366094 - 3367326 | 47567.7 |
| duf2339 domain-containing protein | DU508_14575 | Not Available | Negative | 3367304 - 3369679 | 90210.9 |
| duf4395 domain-containing protein | DU508_14580 | Not Available | Positive | 3369836 - 3370279 | 16450.0 |
| llm class flavin-dependent oxidoreductase | DU508_14585 | Not Available | Negative | 3370281 - 3371312 | 38349.2 |
| molecular chaperone dnak | DU508_14590 | Not Available | Negative | 3371667 - 3373523 | 67763.2 |
| glycosyltransferase | DU508_14595 | Not Available | Negative | 3373894 - 3375117 | 46717.1 |
| pp_02881 | DU508_14600 | Not Available | Positive | 3375279 - 3375860 | Not Available |
| 4fe-4s dicluster domain-containing protein | DU508_14605 | Not Available | Positive | 3376023 - 3376694 | 22976.0 |
| hypothetical protein | DU508_14610 | Not Available | Positive | 3376704 - 3377081 | 14803.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

