Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cap domain-containing protein | DU508_14465 | Not Available | Negative | 3346823 - 3347512 | 26590.8 |
| glycoside hydrolase | DU508_14470 | Not Available | Positive | 3347788 - 3348984 | 43872.6 |
| sdr family nad(p)-dependent oxidoreductase | DU508_14475 | Not Available | Negative | 3349054 - 3349818 | 26999.4 |
| arac family transcriptional regulator | DU508_14480 | Not Available | Negative | 3349905 - 3350309 | 15627.7 |
| thua domain-containing protein | DU508_14485 | Not Available | Negative | 3350401 - 3351231 | 32359.2 |
| mutarotase | DU508_14490 | Not Available | Negative | 3352100 - 3352783 | 26768.7 |
| glycine--trna ligase | DU508_14495 | Not Available | Negative | 3352950 - 3354431 | 57131.9 |
| hypothetical protein | DU508_14500 | Not Available | Negative | 3354594 - 3354815 | 8201.97 |
| glycerophosphodiester phosphodiesterase | DU508_14505 | Not Available | Positive | 3355002 - 3355922 | 34685.8 |
| atp-binding cassette domain-containing protein | DU508_14510 | Not Available | Positive | 3356061 - 3356768 | 25982.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

