Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | DU508_14415 | Not Available | Positive | 3336844 - 3337839 | 36874.2 |
| flavin reductase family protein | DU508_14420 | Not Available | Positive | 3338252 - 3339139 | 32666.6 |
| hypothetical protein | DU508_14425 | Not Available | Positive | 3339164 - 3339769 | 23453.6 |
| nlpc/p60 family protein | DU508_14430 | Not Available | Negative | 3339774 - 3340322 | 19992.2 |
| sdr family nad(p)-dependent oxidoreductase | DU508_14435 | Not Available | Negative | 3340628 - 3341329 | 25040.5 |
| type ii toxin-antitoxin system vapc family toxin | DU508_14440 | Not Available | Negative | 3341420 - 3341797 | 14115.4 |
| hypothetical protein | DU508_14445 | Not Available | Negative | 3341787 - 3342029 | 9356.17 |
| aromatic amino acid hydroxylase | DU508_14450 | Not Available | Negative | 3342058 - 3343836 | 66936.0 |
| gtra family protein | DU508_14455 | Not Available | Negative | 3344076 - 3344576 | 19452.3 |
| lta synthase family protein | DU508_14460 | Not Available | Negative | 3344652 - 3346580 | 74059.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

