Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_14315 | Not Available | Negative | 3316409 - 3317335 | 35592.6 |
| hypothetical protein | DU508_14320 | Not Available | Negative | 3317361 - 3317858 | 18997.4 |
| sensor histidine kinase | DU508_14325 | Not Available | Negative | 3318045 - 3319394 | 51223.9 |
| dna-binding response regulator | DU508_14330 | Not Available | Negative | 3319394 - 3320071 | 25105.8 |
| polyketide cyclase | DU508_14335 | Not Available | Negative | 3320348 - 3320884 | 20144.7 |
| group iii truncated hemoglobin | DU508_14340 | Not Available | Negative | 3320943 - 3321338 | 15405.7 |
| hypothetical protein | DU508_14345 | Not Available | Negative | 3321322 - 3321762 | 16522.1 |
| hypothetical protein | DU508_14350 | Not Available | Negative | 3321827 - 3322252 | 15797.1 |
| malate dehydrogenase | DU508_14355 | Not Available | Negative | 3322335 - 3323273 | 32945.1 |
| dna polymerase iii subunit alpha | DU508_14360 | Not Available | Positive | 3323743 - 3328176 | 167044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

