Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_14265 | Not Available | Negative | 3305046 - 3306077 | 36936.4 |
| rlua family pseudouridine synthase | DU508_14270 | Not Available | Positive | 3306179 - 3307207 | 39190.9 |
| 4-amino-4-deoxychorismate lyase | DU508_14275 | Not Available | Positive | 3307211 - 3308053 | 31755.5 |
| hypothetical protein | DU508_14280 | Not Available | Positive | 3308263 - 3309012 | 28198.7 |
| methionyl-trna formyltransferase | DU508_14285 | Not Available | Negative | 3309057 - 3309965 | 33627.7 |
| dna topoisomerase ib | DU508_14290 | Not Available | Positive | 3310054 - 3311100 | 40122.4 |
| pas domain s-box protein | DU508_14295 | Not Available | Positive | 3311124 - 3312971 | 70134.6 |
| hypothetical protein | DU508_14300 | Not Available | Negative | 3313011 - 3313217 | 7679.01 |
| duf1343 domain-containing protein | DU508_14305 | Not Available | Negative | 3313402 - 3314673 | 47087.2 |
| abc transporter permease | DU508_14310 | Not Available | Positive | 3315099 - 3316319 | 46009.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

