Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper-translocating p-type atpase | DU508_14210 | Not Available | Negative | 3287748 - 3289487 | 61603.6 |
| duf3945 domain-containing protein | DU508_14220 | Not Available | Negative | 3290260 - 3291720 | 55731.5 |
| dna-binding protein | DU508_14225 | Not Available | Negative | 3291806 - 3292114 | 12145.7 |
| dna-binding protein | DU508_14230 | Not Available | Negative | 3292127 - 3292480 | 13814.5 |
| tetracycline regulation of excision, rtec | DU508_14235 | Not Available | Negative | 3292731 - 3293576 | 33095.0 |
| hybrid sensor histidine kinase/response regulator | DU508_14240 | Not Available | Negative | 3294125 - 3298093 | 150899.0 |
| susc/raga family tonb-linked outer membrane protein | DU508_14245 | Not Available | Positive | 3298562 - 3301504 | 107421.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_14250 | Not Available | Positive | 3301522 - 3303234 | 64693.3 |
| susf/suse family outer membrane protein | DU508_14255 | Not Available | Positive | 3303372 - 3303833 | 16605.4 |
| pyridoxal-phosphate dependent enzyme | DU508_14260 | Not Available | Negative | 3303925 - 3304803 | 32852.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

