Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_14110 | Not Available | Negative | 3265671 - 3266054 | 14447.0 |
| hsp20/alpha crystallin family protein | DU508_14115 | Not Available | Negative | 3266061 - 3266501 | 16642.5 |
| Trna-cys | Not Available | Not Available | Positive | 3267589 - 3267663 | Not Available |
| cupin-like domain-containing protein | DU508_14125 | Not Available | Positive | 3267882 - 3268736 | 33571.8 |
| duf4833 domain-containing protein | DU508_14130 | Not Available | Negative | 3268750 - 3269340 | 22528.2 |
| gtra family protein | DU508_14135 | Not Available | Negative | 3269370 - 3269825 | 16890.9 |
| cdp-alcohol phosphatidyltransferase family protein | DU508_14140 | Not Available | Negative | 3269822 - 3270514 | 26393.1 |
| phytanoyl-coa dioxygenase | DU508_14145 | Not Available | Negative | 3270672 - 3271478 | 30434.5 |
| sdr family nad(p)-dependent oxidoreductase | DU508_14150 | Not Available | Negative | 3271696 - 3272484 | 28392.8 |
| putative sulfate exporter family transporter | DU508_14155 | Not Available | Positive | 3272781 - 3274157 | 49279.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

