Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DU508_13860 | Not Available | Positive | 3209568 - 3212576 | 109994.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_13865 | Not Available | Positive | 3212600 - 3214222 | 60240.0 |
| hypothetical protein | DU508_13870 | Not Available | Positive | 3214236 - 3215363 | 40845.0 |
| hypothetical protein | DU508_13875 | Not Available | Positive | 3215408 - 3216610 | 45182.6 |
| glycoside hydrolase family 92 protein | DU508_13880 | Not Available | Positive | 3216637 - 3218991 | 87318.1 |
| hydrolase | DU508_13885 | Not Available | Positive | 3219032 - 3220207 | 45502.2 |
| rok family protein | DU508_13890 | Not Available | Positive | 3220203 - 3221075 | 31625.2 |
| transcriptional regulator | DU508_13895 | Not Available | Negative | 3221284 - 3221643 | 14079.1 |
| nadp-dependent oxidoreductase | DU508_13900 | Not Available | Positive | 3221830 - 3222867 | 37416.9 |
| arac family transcriptional regulator | DU508_13905 | Not Available | Positive | 3223118 - 3224050 | 36513.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

