Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | DU508_13810 | Not Available | Positive | 3193780 - 3195489 | 63106.3 |
| tonb-dependent receptor | DU508_13815 | Not Available | Positive | 3195590 - 3198829 | 119886.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_13820 | Not Available | Positive | 3198839 - 3200764 | 72759.7 |
| duf4959 domain-containing protein | DU508_13825 | Not Available | Positive | 3200777 - 3202048 | 46478.9 |
| hypothetical protein | DU508_13830 | Not Available | Positive | 3202061 - 3203269 | 45144.4 |
| crp/fnr family transcriptional regulator | DU508_13835 | Not Available | Negative | 3203397 - 3203996 | 23407.6 |
| srpbcc domain-containing protein | DU508_13840 | Not Available | Positive | 3204368 - 3204796 | 16986.0 |
| gntr family transcriptional regulator | DU508_13845 | Not Available | Negative | 3205011 - 3205745 | 28178.3 |
| hypothetical protein | DU508_13850 | Not Available | Positive | 3206154 - 3207929 | 68336.2 |
| mfs transporter | DU508_13855 | Not Available | Positive | 3207935 - 3209356 | 51501.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

