Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DU508_13760 | Not Available | Positive | 3178038 - 3180332 | 86160.4 |
| sodium transporter | DU508_13765 | Not Available | Positive | 3180334 - 3182013 | 61353.9 |
| arylsulfatase | DU508_13770 | Not Available | Positive | 3182456 - 3183955 | 54735.4 |
| hypothetical protein | DU508_13775 | Not Available | Positive | 3184454 - 3186055 | 61163.8 |
| type 1 glutamine amidotransferase domain-containing protein | DU508_13780 | Not Available | Negative | 3186478 - 3187164 | 24670.1 |
| tetratricopeptide repeat protein | DU508_13785 | Not Available | Positive | 3187769 - 3188698 | 34887.8 |
| dna-binding response regulator | DU508_13790 | Not Available | Negative | 3188756 - 3189460 | 26909.6 |
| sensor histidine kinase | DU508_13795 | Not Available | Negative | 3189463 - 3190905 | 55366.7 |
| carbohydrate-binding protein | DU508_13800 | Not Available | Positive | 3191129 - 3192544 | 53037.5 |
| ahpc/tsa family protein | DU508_13805 | Not Available | Positive | 3192628 - 3193764 | 41166.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

