Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DU508_13710 | Not Available | Negative | 3156931 - 3157905 | 37880.0 |
| hypothetical protein | DU508_13715 | Not Available | Positive | 3158249 - 3159919 | 61975.9 |
| tonb-dependent receptor | DU508_13720 | Not Available | Positive | 3160014 - 3163193 | 117430.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_13725 | Not Available | Positive | 3163199 - 3164779 | 59613.8 |
| duf5017 domain-containing protein | DU508_13730 | Not Available | Positive | 3164773 - 3165696 | 34479.9 |
| glycerophosphoryl diester phosphodiesterase | DU508_13735 | Not Available | Positive | 3165693 - 3168281 | 97713.1 |
| hypothetical protein | DU508_13740 | Not Available | Positive | 3168295 - 3171708 | 128612.0 |
| sgnh/gdsl hydrolase family protein | DU508_13745 | Not Available | Positive | 3171695 - 3173113 | 51796.3 |
| hypothetical protein | DU508_13750 | Not Available | Positive | 3173338 - 3175170 | 68444.9 |
| hypothetical protein | DU508_13755 | Not Available | Positive | 3175272 - 3178025 | 103756.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

