Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethd family reductase | DU508_13660 | Not Available | Positive | 3144079 - 3144423 | 13176.7 |
| hypothetical protein | DU508_13665 | Not Available | Negative | 3144875 - 3145066 | 7399.03 |
| ahpc/tsa family protein | DU508_13670 | Not Available | Negative | 3145686 - 3146801 | 41178.8 |
| ahpc/tsa family protein | DU508_13675 | Not Available | Negative | 3146845 - 3147975 | 42439.0 |
| duf1735 domain-containing protein | DU508_13680 | Not Available | Negative | 3148010 - 3148978 | 34697.3 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_13685 | Not Available | Negative | 3148997 - 3150370 | 50813.2 |
| susc/raga family tonb-linked outer membrane protein | DU508_13690 | Not Available | Negative | 3150383 - 3154018 | 134151.0 |
| fecr family protein | DU508_13695 | Not Available | Negative | 3154279 - 3155469 | 44493.9 |
| rna polymerase sigma-70 factor | DU508_13700 | Not Available | Negative | 3155571 - 3156164 | 22978.9 |
| hypothetical protein | DU508_13705 | Not Available | Positive | 3156476 - 3156895 | 16801.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

