Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 307111 - 307198 | Not Available |
| yihy/virulence factor brkb family protein | DU508_01280 | Not Available | Negative | 307294 - 308283 | 37550.8 |
| acyl-coa thioesterase | DU508_01285 | Not Available | Negative | 308288 - 308701 | 15854.4 |
| endolytic transglycosylase mltg | DU508_01290 | Not Available | Negative | 308701 - 309756 | 40061.5 |
| pasta domain-containing protein | DU508_01295 | Not Available | Negative | 309764 - 310534 | 27857.6 |
| d-alanine--d-alanine ligase | DU508_01300 | Not Available | Positive | 310750 - 311736 | 36734.9 |
| crp/fnr family transcriptional regulator | DU508_01305 | Not Available | Positive | 311754 - 312338 | 22361.7 |
| duf983 domain-containing protein | DU508_01310 | Not Available | Positive | 312440 - 312838 | 15120.8 |
| hypothetical protein | DU508_01315 | Not Available | Negative | 312922 - 313446 | 19675.5 |
| copper homeostasis protein cutc | DU508_01320 | Not Available | Negative | 314062 - 314853 | 28544.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

