Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | DU508_13505 | Not Available | Negative | 3116850 - 3117983 | 42560.7 |
| histidinol-phosphate transaminase | DU508_13510 | Not Available | Negative | 3117988 - 3119028 | 38868.6 |
| histidinol dehydrogenase | DU508_13515 | Not Available | Negative | 3119245 - 3120546 | 46868.4 |
| atp phosphoribosyltransferase | DU508_13520 | Not Available | Negative | 3120607 - 3121458 | 30746.5 |
| l,d-transpeptidase | DU508_13525 | Not Available | Positive | 3121736 - 3123298 | 60511.8 |
| hypothetical protein | DU508_13530 | Not Available | Positive | 3123317 - 3123721 | 15270.4 |
| hypothetical protein | DU508_13535 | Not Available | Positive | 3124271 - 3126310 | 75899.5 |
| dihydroorotase | DU508_13540 | Not Available | Positive | 3126307 - 3127563 | 45477.6 |
| hypothetical protein | DU508_13545 | Not Available | Positive | 3127737 - 3128405 | 25650.0 |
| duf4199 domain-containing protein | DU508_13550 | Not Available | Positive | 3128421 - 3128990 | 20705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

