Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | DU508_13455 | Not Available | Positive | 3104750 - 3105535 | 29506.0 |
| hypothetical protein | DU508_13460 | Not Available | Positive | 3105574 - 3111378 | 221089.0 |
| hypothetical protein | DU508_13465 | Not Available | Positive | 3111489 - 3111674 | 7322.91 |
| hypothetical protein | DU508_13470 | Not Available | Positive | 3111667 - 3112116 | 16843.0 |
| wd40 repeat domain-containing protein | DU508_13475 | Not Available | Negative | 3112113 - 3113012 | 33925.5 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DU508_13480 | Not Available | Negative | 3113169 - 3113771 | 22659.1 |
| imidazole glycerol phosphate synthase subunit hisf | DU508_13485 | Not Available | Negative | 3113857 - 3115086 | 45378.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DU508_13490 | Not Available | Negative | 3115242 - 3115991 | 27998.0 |
| imidazole glycerol phosphate synthase subunit hish | DU508_13495 | Not Available | Negative | 3115993 - 3116586 | 21563.0 |
| hypothetical protein | DU508_13500 | Not Available | Negative | 3116642 - 3116893 | 9371.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

