Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | DU508_13355 | Not Available | Negative | 3086680 - 3087513 | 30854.0 |
| doxx family protein | DU508_13360 | Not Available | Negative | 3087618 - 3087983 | 13758.3 |
| transcriptional regulator | DU508_13365 | Not Available | Positive | 3088090 - 3088440 | 13355.3 |
| voc family protein | DU508_13370 | Not Available | Negative | 3088496 - 3088894 | 14983.7 |
| hypothetical protein | DU508_13375 | Not Available | Negative | 3089115 - 3090512 | 54869.7 |
| spore protein | DU508_13380 | Not Available | Negative | 3090954 - 3091124 | 6243.57 |
| Trna-cys | Not Available | Not Available | Positive | 3091159 - 3091232 | Not Available |
| rna methyltransferase | DU508_13390 | Not Available | Negative | 3091302 - 3092048 | 27761.6 |
| hypothetical protein | DU508_13395 | Not Available | Positive | 3092039 - 3094453 | 91717.8 |
| 2'-5' rna ligase family protein | DU508_13400 | Not Available | Negative | 3094456 - 3095031 | 22467.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

