Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DU508_13300 | Not Available | Negative | 3076687 - 3078594 | 71951.8 |
| transcriptional regulator | DU508_13305 | Not Available | Positive | 3078918 - 3079328 | 14941.8 |
| nad-dependent epimerase/dehydratase family protein | DU508_13310 | Not Available | Positive | 3079390 - 3080040 | 23375.6 |
| quinone-dependent dihydroorotate dehydrogenase | DU508_13315 | Not Available | Positive | 3080144 - 3081172 | 38084.0 |
| hypothetical protein | DU508_13320 | Not Available | Negative | 3081404 - 3081679 | 10606.0 |
| thiamine phosphate synthase | DU508_13325 | Not Available | Negative | 3081681 - 3082310 | 23915.8 |
| air synthase | DU508_13330 | Not Available | Negative | 3082307 - 3083362 | 38064.6 |
| class i sam-dependent methyltransferase | DU508_13335 | Not Available | Negative | 3083362 - 3084084 | 28448.2 |
| dihydrofolate reductase | DU508_13345 | Not Available | Negative | 3085206 - 3085763 | 20961.1 |
| hypothetical protein | DU508_13350 | Not Available | Negative | 3085840 - 3086208 | 13859.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

