Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DU508_13240 | Not Available | Positive | 3063438 - 3065318 | 69593.7 |
| eve domain-containing protein | DU508_13245 | Not Available | Positive | 3065753 - 3066166 | 15918.9 |
| sodium:proton antiporter | DU508_13250 | Not Available | Negative | 3066259 - 3067446 | 43796.5 |
| acyl-coa thioesterase | DU508_13255 | Not Available | Negative | 3067514 - 3068035 | 19377.4 |
| alpha-amylase | DU508_13260 | Not Available | Positive | 3068225 - 3069715 | 57447.5 |
| xylose isomerase | DU508_13275 | Not Available | Negative | 3070677 - 3071603 | 34825.7 |
| fad:protein fmn transferase | DU508_13280 | Not Available | Negative | 3071633 - 3072628 | 36626.6 |
| dehydrogenase | DU508_13285 | Not Available | Negative | 3072634 - 3073953 | 48949.2 |
| formylglycine-generating enzyme family protein | DU508_13290 | Not Available | Negative | 3073987 - 3074952 | 36718.1 |
| duf5103 domain-containing protein | DU508_13295 | Not Available | Negative | 3075095 - 3076372 | 49679.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

