Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DU508_13135 | Not Available | Negative | 3037415 - 3037900 | 18187.8 |
| duf4199 domain-containing protein | DU508_13140 | Not Available | Negative | 3037897 - 3038406 | 19233.1 |
| winged helix-turn-helix transcriptional regulator | DU508_13145 | Not Available | Negative | 3038521 - 3038988 | 18004.6 |
| hypothetical protein | DU508_13150 | Not Available | Negative | 3039169 - 3039681 | 19546.1 |
| class c beta-lactamase-related serine hydrolase | DU508_13155 | Not Available | Negative | 3039929 - 3041035 | 41685.9 |
| voc family protein | DU508_13160 | Not Available | Negative | 3041244 - 3041687 | 16944.2 |
| hypothetical protein | DU508_13165 | Not Available | Negative | 3041702 - 3041938 | 8858.08 |
| hypothetical protein | DU508_13170 | Not Available | Negative | 3041932 - 3042294 | 13855.7 |
| crp/fnr family transcriptional regulator | DU508_13180 | Not Available | Positive | 3043396 - 3043995 | 23203.8 |
| response regulator | DU508_13185 | Not Available | Positive | 3044331 - 3048545 | 159427.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

