Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DU508_13085 | Not Available | Negative | 3030090 - 3030416 | 12332.0 |
| type ii toxin-antitoxin system rele/pare family toxin | DU508_13090 | Not Available | Negative | 3030421 - 3030717 | 11533.9 |
| arac family transcriptional regulator | DU508_13095 | Not Available | Negative | 3030789 - 3031703 | 35042.5 |
| sdr family nad(p)-dependent oxidoreductase | DU508_13100 | Not Available | Negative | 3031723 - 3032463 | 26029.4 |
| arac family transcriptional regulator | DU508_13105 | Not Available | Negative | 3032839 - 3033783 | 37037.6 |
| fad-binding monooxygenase | DU508_13110 | Not Available | Positive | 3033867 - 3034994 | 42463.8 |
| dinb family protein | DU508_13115 | Not Available | Negative | 3035370 - 3035873 | 19974.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DU508_13120 | Not Available | Negative | 3035937 - 3036431 | 18270.5 |
| nuclear transport factor 2 family protein | DU508_13125 | Not Available | Negative | 3036617 - 3036997 | 14109.2 |
| duf2200 domain-containing protein | DU508_13130 | Not Available | Negative | 3037051 - 3037407 | 13930.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

