Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | DU508_13035 | Not Available | Positive | 3021441 - 3022010 | 20630.6 |
| carboxymuconolactone decarboxylase family protein | DU508_13040 | Not Available | Positive | 3022029 - 3022607 | 20515.0 |
| alpha/beta fold hydrolase | DU508_13045 | Not Available | Positive | 3022677 - 3023489 | 29233.5 |
| hypothetical protein | DU508_13050 | Not Available | Positive | 3023573 - 3024595 | 39650.5 |
| hypothetical protein | DU508_13055 | Not Available | Positive | 3024625 - 3024834 | 7987.73 |
| hypothetical protein | DU508_13060 | Not Available | Positive | 3024818 - 3026263 | 54501.3 |
| type 1 glutamine amidotransferase | DU508_13065 | Not Available | Positive | 3026299 - 3027093 | 29203.5 |
| short-chain dehydrogenase | DU508_13070 | Not Available | Positive | 3027120 - 3027932 | 29618.9 |
| tlpa family protein disulfide reductase | DU508_13075 | Not Available | Positive | 3027983 - 3028723 | 28367.7 |
| aldo/keto reductase | DU508_13080 | Not Available | Positive | 3028777 - 3029763 | 36437.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

